Planet Four and Shapely

I thought I’d share a figure from last week’s science team call that the science team discussed.  Michael was looking at combining clustered features with Shapely, a Python package for manipulation and analysis of planar geometric objects. Partly this is to investigate whether this could be used to deal with differing clusters in the overlap regions between neighboring subject images and also test out if we can use the software package to easily calculate the total area covered by the seasonal fans and blotches.  Shapely does a good job of merging the blotches together as you can see from the figure below. This definitely looks like a way forward for calculating the total surface area per time of year covered in dark fan material.

 

Image credit: K-M aye

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New Data Coming to Planet Four: Ridges Soon

Thanks to your help, we’ve finished search area two for Planet Four: Ridges. We’re working on analyzing the results and hopefully starting work on a paper based on those results. Laura has come up with a new region and slightly different type of polygonal ridge to search for. We’re working on getting that dataset processed and uploaded to the site. We hope to have this completed by the end of September with updated tutorials. We’ll keep you posted. In the meantime, Planet Four and Planet Four: Terrains could use some help if you can spare the time to classify an image or two.

 

Dealing With Overlap

We’re now working on dealing with the last major component of the Planet Four data processing pipeline, the overlap regions of neighboring subject images. We divide each HiRISE images into many smaller 840×648 pixel subimages or subjects that we show on Planet Four. To make sure we capture fans and blotches that are the edges of our subject images, we have a 100 pixel overlap between the neighboring left and bottom subject images. This means that we have duplicate markings that cover the same source which we need to identify as being the same source to allow for counting the number of seasonal sources and to also accurately measure the shape of very large fans or blotches.

We spent part of the last science call looking at some examples of overlap regions and the outputting fan and blotch shapes after clustering to decide what to do.

 

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Image credit: K-M. Aye

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If you focus on the center sources in the two plots above, you see there are lots of markings identifying the same shape from the different subject images that contained varying parts of the central  blotch or fan. Based on what we see, we think we if in the overlap region we only keep the largest source and anything that extends beyond that we will accurate identify the fan or blotch being marked. We’re going to test that this week and review the output from the catalog for a small portion of the overlap regions to confirm.

Once we sort what to do in the overlap regions, the focus should be writing all of the steps in the processing pipeline into the paper draft.

Planet Four: Terrain’s First Science Paper Accepted for Publication

I’m pleased to announce that our first scientific paper for Planet Four: Terrains  was accepted to the journal Icarus.  Below is a snapshot from the top of the paper manuscript, and the paper is publicly available via the free preprint we’ve put online here.

A big thank you to all the volunteers who contributed to the publication. We acknowledge everyone who contributed to the project on the results page of the Planet Four at: http://p4tauthors.planetfour.org

The paper presents the first spider and swiss cheese terrain catalog derived from your classifications. 90 CTX images comprising ~11% of the Martian South Polar region southward of -75 N latitude were searched by Planet Four: Terrains volunteers. This comprised approximately 20,000 subject images reviewed on the Planet Four: Terrains website with 20 independent reviews. The P4: Terrains search coverage is shown below:

Footprint of CTX image searched by Planet Four: Terrains for the first paper

Applying a weighting scheme, we combine classifications together to identify spiders and swiss cheese terrain. The weighting scheme isn’t testing anyone, but it helps us find more spiders by allowing us to pay slightly more attention to those that are better at identifying spiders and help increase the overall detection efficiency of the project. Details can be found in the paper.

Using the weighting scheme each Planet Four: Terrains subject has a spider score which is the sum of the  weights of the volunteers who identified spiders in the image divided by the sum of the weights of the volunteers who reviewed the subject image. Using classifications from Anya and I for a very small subset of the subject images, we found a spider scores above which we’re highly confident the identifications have few false positives.

To our surprise when we compared to the map of the secure spider locations to the geologic map of the South Polar region, we found araneiforms or spiders where we didn’t expect them to be. In previous surveys of the South Polar region, araneiforms were found to be located only on the South Polar Layered deposits (SPLD). The SPLD has been measured to have a height of ~4 km and covering a surface area of ~90,000 square kilometers mainly comprised of  varying dust and water ice layers as well as some buried carbon dioxide and water ice deposits. Previous works have theorized that something about the unconglomerated nature of the SPLD, might make it easier for spiders to form there than other areas of the South Polar region

CTX side view of the SPLD

Magenta points show the Planet Four: Terrains spider identifications on top of the geologic map. The dark blue represents the South Polar Layered Deposits (SPLD).

To confirm these identifications were real, we needed HiRISE imaging.  CTX has a resolution of 6-8 m/pixel. HiRISE can resolve up to a coffee table on Mars with a resolving power of 30 cm/pixel. With HiRISE we could see the wiggly dendritic nature of the channels and as well see seasonal fans to confirm that these form via the carbon dioxide jet process.  8 areas outside of the SPLD were targeted last Summer and Fall by HiRISE.

Below are just a few examples of the HiRISE subframes of these regions off the SPLD:

Image credit: NASA/JPL/University of Arizona

Image credit: NASA/JPL/University of Arizona – Schwamb et al. (in press)

Image credit: NASA/JPL/University of Arizona – Schwamb et al. (in press)

Image credit: NASA/JPL/University of Arizona – Schwamb et al. (in press)

Image credit: NASA/JPL/University of Arizona – Schwamb et al. (in press)

There be spiders! Araneiform channels can clearly be seen in the images above. The HiRiSE images confirm the spider/araneiform identification. We also see seasonal fan activity as well. For the first time we have found spiders/araneiforms outside of the SPLD!

This result is exciting. For some of these areas we have sequences with HiRISE taken over time which we hope we can put it into Planet Four to measure how the fans sizes and appearance are different from their counterparts on the SPLD. Now we get a chance to study how these locales off the SPLD are similar or differ from the SPLD and try to learn why these areas and not others have spider channels.

We’ve only searched a small fraction of the Martian South Polar region. We have more images on the site to expand the search area to see where else spiders/araneiforms may be. Help us today by classifying an image or two at http://terrains.planetfour.org

 

Ziggy Stardust and the Spiders from Mars: Part III –Answers to Questions for the Science Team

Planet Four volunteer Peter Jalowiczor got asked a great set of questions after his public talk to his local Astronomical society. Below you’ll find the replies from Anya:

What evidence is there for cracking (of the ice) in the Martian surface?

We have actually observed the cracks in the seasonal ice layer appearing and evolving. We have seen them in multiple locations and several years. There is a paper on this:
Portyankina, G., Pommerol, A., Aye, K.-M., Hansen, C. J., & Thomas, N. (2012). Polygonal cracks in the seasonal semi‐translucent CO2 ice layer in Martian polar areas. Journal of Geophysical Research: Planets, 117(E2), DOI: http://doi.org/10.1029/2011JE003917. It has examples of observed cracks in spring from southern and northern hemispheres.

Was there certainty that the channels were not ridges? (Yes, this is an optical illusion!)

Yes, there is certainty. We know the direction of sun illumination on every image that HiRISE (or any other camera) takes. We can compare it to the locations of shadowed and illuminated sides of the channels. We have done it multiple times and it always fits to the assumption that those are channels not ridges.

Where does the blue colour come from?

This question has 2 parts:
1)    Camera technology: the blue color is detected by the CCD that has a filter in front of it and thus only sensitive to blue part of visible spectra. In HiRISE we call it blue-green channel and highest sensitivity centered at 536 nm.

2)    Light scattering by different materials: when light hits the surface of Mars, it is scattered differently by different material. Martian “soil” most efficiently scatters red light and makes Mars look brown-red. Fresh frost scatters rather efficiently most of sunlight spectral range, but particularly well in the blue part. This is true for both, CO2 or water frost. Thus, the blue patches in HiRISE images in polar regions are where CO2 or water ice lies at the top of the martian soil.

Is the North Polar region of Mars going to be investigated in the same way as the South polar region?

We would like to do that, given we get support and funding.

What height are the geysers?

We have not observed them in action, which means only theoretical estimates exist. For a jet that is constantly outgassing early in spring from underneath 1-m thick ice layer with a vent that is <1m2, the maximum estimated height is 70 m. If the pressure under the ice first builds up and then releases in eruption-style event, the height estimate is several times higher but highly uncertain.

Is there an imaging dataset, perhaps an experiment on a satellite, which could enable these heights to be measured more accurately?

Not currently. We are proposing for a small mission to be able to do just that.

How often do we return to each of the imaged areas? Surely there must be some follow-up to see how the features have developed.

We image every location several times per spring. Our main locations (Inca City, Ithaca, Giza, etc.) get up to 10 images per season. We also image them every summer when they are free of ice. Repeated imaging in summer is targeted to detect the changes in the araneiform structures, but it is very tricky goal, as the atmospheric and illumination conditions should be very similar in order to definitely detect any topography changes. Right now we have 5 martian years of observations but no certain detected topography changes.

Ziggy Stardust and the Spiders from Mars – David Bowie was right! Part II

Today we have a guest post by Planet Four volunteer Peter Jalowiczor.

As a Planet Four contributor for a number of years this blog is a description of a presentation I recently gave at my local Astronomical society. It was based, of course, on my P4 work and included a preliminary discussion on Mars before starting on the focus of the talk – this project.  About two months earlier I had given a talk based on material provided by Meg so everyone was already familiar with the project as well as everyone involved. Here is how the second talk was structured.

Introduction to P4

P4 is a citizen science project designed to help planetary scientists identify and measure features on the surface of Mars, the images on the site are around the Southern polar region, an area of Mars that we know little about and the majority of which have never before been seen by human eyes!

Mars throughout the Ages

Following the introduction came a brief discussion of the history of observation from the first observations of planetary motion by Kepler and the first telescopic observations of Mars by Galileo, to maps (of Mars) by Christiaan Huygens, Giovanni Cassini on to Beer & Madler, Richard Proctor, Schiaparelli, Camille Flammarion and of course Percival Lowell and his famous Martian Canals. But, how was this all relevant to P4? The answer was that the HiRISE experiment on the MRO spacecraft was mapping areas around the South Pole…

Mars in the Solar System

How does Mars compare as a planet within the terrestrial group? Following a comparative overview of the five terrestrial bodies (including the Moon) in the inner Solar System.  In this group, Mars is intermediate in its properties. For example, compared to the largest body (the Earth) and the smallest (the Moon) it displays features on its surface, which are Earth-like: evidence of river valleys, lakes and the likelihood of an ancient Ocean in the Northern hemisphere. Whereas in the Southern hemisphere, the landscape is more primitive and cratered, more Moon-like. A discussion into why this was so and the importance of the surface area to volume ratio and its effect on planetary evolution across the terrestrial group. Mars’ properties in its own right was briefed.

The Planet Four Project

A detailed description of the project starting with the HiRISE experiment. From an altitude of 200 to 400 kilometers above Mars, surface images are acquired containing individual, basketball-size (30 to 60 centimeters) pixels, allowing features 1.2m to 2.4m across to be resolved. Large swaths of the surface are imaged: 20,000 x 126,000 pixels and the image is broken up into individual P4 tiles.

 

Citizen scientists mark dark fans and dark blotches that appear and disappear during Spring/ Summer around the South Pole of Mars. The dark fans and blotches appear in the Southern spring when the ice cap begins to thaw and sublimate back into the atmosphere. The fans and blotches then disappear at the end of the summer when there is no more ice left. How do these fans form, how they repeat from Spring to Spring? What does this tell us about the surface winds on the South Pole?  How would these features enable scientists to build-up a global map of wind-directions on Mars.

30 images (tiles) were shown from categories such as: #spiders, #fans, #blotches, #yardangs, #dendritic features, #Mars-has-the-blues…

Analysis

Results of work carried out by myself. Occasionally, during classification, the #measurement tag was used by myself to measure various features within the tile. This started out as no more than an intention to log the size of features. After a few years a few hundred measurements had accumulated.

I found that:

  • This was biased towards the measuring of blotches.
  • 31-40m was the modal, or most commonly occurring size of blotch within the tile.
  • 10m-90m – fan sizes were grouped in this region.
  • Where the blotch, spider or fan went outside the range, an attempt was made to estimate its size.
  • The images of the tiles here ranged from ~150m x 200m to 366m x 475m.

However, the constraints of the tile parameters mean that the sizes may not be a true reflection of reality; and this was a simple experiment in science, The  results could be improved with a larger sample size (more measurements) particularly if measurements taken outside the tiles.

pastedImage2

This image was taken with the Sun about 0 deg above the horizon and started a lot of discussions how these channels looked like ridges. Particularly with such a low Sun angle.

pastedImage3

Linear venting. What evidence was there for cracking in the Martian surface? One member asked before this image came up and was discussed!

pastedImage4

My favourite spider…

Q&A

This is based on questions/ discussions, which came up both during and after the lecture.  Some I answered such as the linear venting (to the question below) as it was asked before the relevant slide came up! For some of the other questions I gave partial answers and we agreed that this should be forwarded on to Meg, and the Planet Four Science Team is going to answer these in a following blog post.

  • What evidence is there for cracking (of the ice) in the Martian surface?
  • Was there certainty that the channels were not ridges? (Yes, this is an optical illusion!)
  • Where does the blue colour come from?
  • Is the North Polar region of Mars going to be investigated in the same way as the South polar region?
  • What height are the geysers?
  • Is there an imaging dataset, perhaps an experiment on a satellite, which could enable these heights to be measured more accurately?
  • How often do we return to each of the imaged areas? Surely there must be some follow-up to see how the features have developed.

And finally!

The talk started with the good news of a certain Sagan Medal recipient and ended with the news that there was now an alternative to Mars bars with Martian cake, however this had to be refrigerated at Martian polar temperatures…

Dealing with Overlap

Now that we have frozen development of the clustering algorithms for both blotches and fans and reviewed the stage of combining the different types of clusters together, we are working on the next issue. This is dealing with markings from the overlap regions of Planet Four subject images. For most Planet Four subject images, there is 100 pixel overlap with a neighboring subject image. So in our current catalog we have duplicates possibly of seasonal fans and blotches that appeared in more than one Planet Four subject image.

We’ve started to look into what’s the best wave to deal with this. The main reason we have the overlapping regions between adjacent Planet Four subject images is to make sure we identify seasonal fans that would get cut off between the two subject images if there was no overlap. The overlap should ensure at least one of the subject images has full view of the source, so we don’t miss anything.

Here’s an example of four adjacent subject images combined and the clustered markings drawn on.

Combination of four Planet Four subject images which overlap and the resulting catalog markings based on Planet Four volunteer classifications. Image Credit: Michael Aye

You can see that in the current catalog we  get two overlapping blotches with slightly different orientations and centers generated from combining the volunteer classifications. If you look at what is in our catalog for each subject image that makes up the ensemble, you see that for one of the subject images the  blotch is only partially on the image. The resulting blotch marker from the combined classifications is also partially on the image, it extends beyond. We might be able to use this fact that people extended the drawing markings to fit the shape if the source went over the edge,  to identify those seasonal fans and sources that extend beyond the extend of the subject image and when that happens use the catalog entry from the overlapping subject images where the source was fully in the subject image. We’re testing this hypothesis by performing a manual review in the next week or so of the catalog output of a sample of overlap regions.

 

The right hand size blotch and resulting combined user drawn marking is partially on the subject image. Image credit- Michael Aye

 

subject image and associated blotch from the combined volunteer markings where the blotch is more visible Image credit- Michael Aye

More Examples of Polygonal Ridges

Today we have some more examples of polygonal ridges as spotted on Planet Four: Ridges. We perused Talk and came up with these images as spotted by volunteers. All or part of these images have polygonal ridges:

 

A little bit fan and a little bit blotch

We’ve been reviewing the output coming from the full Planet Four data reduction pipeline now that we’ve frozen development on the fan and blotch clustering codes. Once we have the fan markings and blotch markings clustered individually, we then have a stage that combines the individual clusters to decide it a source marked by Planet Four volunteers is really a blotch or fan by find clusters where there centers on top of each other and then depending on how many fan markings went into the fan cluster and how many markings went into the blotch cluster we decide it’s a fan or a blotch for the final catalog. What we found in the catalog review that there are nice cases where there are sources that aren’t quite a fan only or not just a blotch. With a citizen science approach we’re able to capture that fuzziness  which is fantastic. We highlight a few examples below selected by Michael Aye, who has been hard at work developing this pipeline over the past several years.

In all three figures: the top left is the Planet Four subject image, top middle is all the individual volunteer fan markings, top right is all the individual volunteer blotch markings, the bottom right is the blotch clusters after clustering, the middle bottom is the fan clusters after clustering, and the bottom left is the final sources after combining the fans and blotches (the dots in this panel show the center position of the final fan or blotch in our catalog).

Image credit: Michael Aye

Image credit: Michael Aye

Image credit: Michael Aye

As you can see from above, we’re making great progress on the Planet Four data reduction pipeline. Next steps including handing the fact that the edges of most of our Planet Four subject images overlap with neighboring subject images, and ensuring that we merge overlapping volunteer markings covering the same spot on two different subject images.

Happy 2nd Birthday Planet Four: Terrains

Happy Birthday Planet Four: Terrains! Last Thursday marked the second anniversary of the launch of Planet Four: Terrains. Thank you for all of your help over the past two years. We couldn’t do this without you. To celebrate here’s a recipe for a Martian South Polar Trifle for you to make for your own Mars party. It’s inspired by this recipe:

  • 1 package (20 ounce) chocolate cream filled cookies like Oreos or Hydrox
  • 16 ounces of cream cheese
  • 1/4 cup of unsalted butter
  • 2 cups of  powdered sugar
  • 2 small packages of instant vanilla pudding mix
  • 3.5  cups milk (recommend dairy milk  – skim to whole works fine)
  • 1 tub (20 ounce) of whipped topping (not canned whipped topping but the kind you find in the freezer section). ( You can also make your own from scratch using whipping cream if you like. Just add a little bit of powdered sugar mixed in to taste)

Making the ground layer: Place chocolate cream filled cookie in a bowl or plastic bag, saving 4-6 cookies for the top later. Use a rolling pin, bottom of a glass, etc to crush the cookies. Place 3/4 of the crushed cookies on the bottom of a nine-inch glass pie plate or any glass container so you can see through the sides if possible.

Making the seasonal ice sheet mixed with seasonal ice and boulder: Soften the butter., then mix together cream cheese, butter, and powdered sugar until smooth (electric mixer or whisk is fine). With whisk combine the pudding mix with the milk until smooth and slightly thickened. Fold together cream cheese mixture, whip topping, and pudding mixture.  Add 2-3 drops of  red food coloring to get a light red color (the red food color and the power sugar represent the atmospheric dust trapped in the ice sheet). Then mix in the remaining 1/4 of the crushed cookies to represent boulders trapped in the ice sheet. Pour the mixture over the ground layer of cookies.

Topping of seasonal fans: Crush the remaining few cookies very finely, sprinkle on the top to create seasonal fan shapes

Refrigerate the trifle for 3 hours or more before serving.

Enjoy!

 

 

The inspiration – seasonal fans in the South Polar region as imaged by HiRISE in the Southern spring or summer.